Department of Biological Sciences

Permanent URI for this collectionhttps://dspace.njala.edu.sl/handle/20.500.144402/136

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Author: search.filters.author.Sesay, Janatu VeronicaHas files: No

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    Genetic Structure and Diversity Study of Cassava (Manihot esculenta) Germplasm for African Cassava Mosaic Disease and Fresh Storage Root Yield
    (Scientific Research Publishing, 2023) Sesay, Janatu Veronica
    A better understanding of population structure and genetic diversity among cassava germplasm for African cassava mosaic disease and fresh root yield traits is useful for cassava improvement programme. Phenotype-based selection for these traits is cumbersome due to phenotypic plasticity and difficulty in screening of phenotypic-induced variations. This study assessed quantitative trait loci (QTL) regions associated with African cassava mosaic disease (ACMD) and fresh storage root yield (FSRY) in 131 cassava (Manihot esculenta) genotypes using a genome-wide association study (GWAS). The single nucleotide polymorphism (SNP) loci and associated candidate genes, when validated, would be a valuable resource for marker-assisted selection in the breeding process for development of new cassava genotypes with improved resistance to ACMD and desirable high root yield. Population structure analysis using 12,500 SNPs differentiated the 131 genotypes into five distinct sub-groups (K = 5). Marker-trait association (MTA) analysis using the generalized linear model identified two QTL regions significant for ACMD and three for FSRY. This study demonstrated that DArTseq markers are useful genomic resources for genome-wide association studies of ACMD and FSRY traits in cassava for the acceleration of varietal development and release.
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    Ethnobotanical Knowledge of Local Cassava Varieties and Characteristics Desired by Farmers in Sierra Leone
    (Scientific Research Publishing, 2023) Sesay, Janatu Veronica
    It has been observed that farmers adopt only a small number of the “improved” cultivars. A nationwide germplasm collection exercise in February 2018 provided the opportunity to collect indigenous technical knowledge (ITK) of the diversity of cassava varieties in terms of: their morphology, growth characteristics, uses (of tubers and leaves) and desirable characteristics. The objective is to see to what extent the objectives of the plant breeders are consistent with what farmers’ value. We performed 405 structured and semi-structured interviews with informants who were selected based on “purposive household sampling”. We found a considerable turn-over in cassava varieties, just over a third (45) have been in cultivation for at least 40 years, however, since the end of the civil war an additional 25 varieties are cultivated, while others varieties seem to have disappeared. One major issue with estimating turnover of varieties is whether the same variety might have several local names, and conversely the same name may be applied to different cultivars. Farmers overwhelmingly use ITK to select and preserve cassava germplasm for future use. Farmers have a clear preference for: sweet taste, high yield, early maturity and easy cooking and preferentially adopt cultivars that have those qualities. Cassava is primarily a human food eaten boiled or fried, some are processed into fufu and gari, and uses as livestock feed and medicine are reported but at low levels. The information produced during this study could help plant breeders choose selection criteria that will ensure their efforts are adopted and sustainable, the importance of preserving the genetic resources of local cultivars is also highlighted.